The stormy weather has forced rail operator First Capital Connect to cancel all services from Bedford and Flitwick.
Following morning checks by Network Rail, First Capital Connect are not running any services on the Thameslink line until further notice.
Some East Midlands trains are running north from Bedford but all trains heading south have been cancelled until midday.
However London Midland is running a normal service on the Bedford to Bletchley line.
Weather experts predict the stormy weather and high winds will continue until late morning although there will continue to be blustery weather all day.
Other parts of the country are without power but so far there appears to have been no major disruption in the Bedford area.
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